Taper Madness: Why 78% of Marathoners Get Phantom Pains (And What to Do About It)

You’ve just finished your last long run. You should feel relieved. Instead, you feel like you’re falling apart.

Your left calf, which hasn’t bothered you once in five months of training,  suddenly has a mysterious twinge. Your legs feel heavy and slow on easy runs. You’re exhausted, irritable, and lying awake at 3 AM wondering if you have time to squeeze in one more 20-miler before race day.

Welcome to the taper. And unfortunately, this is exactly how it’s supposed to feel.

That’s not a comfort most runners want to hear. But here’s the thing: research shows that up to 78% of marathon runners experience significant anxiety, phantom pains, and mood disruption during their taper period,  and the runners who understand why it happens handle it significantly better.

A study by McCormick et al. [1] found that runners who were educated about expected taper symptoms experienced 34% less anxiety during the reduction phase.

Simply put: knowing what’s happening in your body is one of the most effective tools you have right now.

So let’s look at the science behind why resting makes you feel worse before it makes you feel better, how to tell a real problem from a phantom one, and what to do with all that nervous energy in the final weeks before your race.

What the Taper Is Actually Doing to Your Body

Most runners understand the taper in theory: reduce volume, arrive at the start line fresh.

What they don’t understand is the cascade of physiological events happening under the surface, and why those events feel, paradoxically, pretty awful.

Your Glycogen Tank Is Finally Filling Up

During hard training, your muscles are constantly working through their glycogen stores,  your primary fuel source for anything lasting longer than 90 minutes.

When you reduce training volume while maintaining carbohydrate intake, something remarkable happens: a process called glycogen supercompensation. Research from the Journal of Applied Physiology [2] shows that muscle glycogen concentrations can increase by 15% in just the first week of tapering, and continue to rise with proper execution.

Studies suggest muscles can store up to 20–25% more glycogen than usual during a well-executed taper.

The practical upside: a fuller fuel tank on race day means a delayed wall and more energy when you need it most.

The practical downside right now: glycogen binds with water, which makes your legs feel dense and heavy. That heaviness isn’t fatigue, it’s stored fuel. It will feel very different when race-day adrenaline kicks in.

Your Muscles Are Repairing Months of Damage

Hard training creates microscopic tears in muscle fibers. That’s normal, it’s how adaptation happens.

But continuous training means those repairs are always being interrupted before they’re complete.

Taper gives your body the uninterrupted runway it needs to finish the job: rebuilding damaged tissue, strengthening connective tissue, and clearing accumulated inflammatory markers.

This repair process can cause unfamiliar twinges and aches,  sensations that weren’t there during peak training, when fatigue was masking them.

Your Neuromuscular System Is Sharpening

One of the most counterintuitive findings in taper research: your muscles actually get more powerful when you reduce volume. A study [3] found that neuromuscular power output improved by an average of 6.2% following optimal taper protocols.

Your muscles weren’t getting weaker during peak training. They were getting tired.

Taper allows them to express the fitness you’ve already built, without the weight of accumulated fatigue pressing down on them.

A three-week taper has been shown to improve recreational marathon finish times by approximately 2.6%, or an average of 5 minutes and 32 seconds, according to a 2021 study published in Frontiers in Sports and Active Living [4].

That’s not about gaining new fitness. That’s about finally being able to express the fitness you’ve already earned.

Why You Feel So Terrible Right Now

The Phantom Pain Problem

Runners have a name for it: taper madness. And the phantom pains are one of its most disorienting symptoms.

You’ve been training for months without a hint of trouble in your left knee. Now, three weeks out from race day, it aches. Your Achilles feels tight. Something is “off” with your hip.

There are two overlapping explanations for this, and both are grounded in real physiology.

First, your immune system has been operating in a kind of suppressed survival mode during peak training. According to David Nieman’s open window theory [5], immunity may be suppressed in the 3 to 72 hours following an intensive training session,  and during a heavy training block, the next hard session often starts before that window closes.

When you finally reduce the load, your immune system kicks back into gear. It starts dealing with lingering issues: minor inflammation, low-grade viruses, tissue that needed attention. The result is a wave of aches, fatigue, and sometimes a mild cold,  which is genuinely your body doing cleanup work it couldn’t do during training.

Second, the psychological component is real.

When your race is three weeks away and your identity has been tied to weekly mileage for months, you become hyperaware of every physical sensation in your body.

Anxiety causes muscular tension. Muscular tension can reduce circulation to tissues. Reduced circulation can create genuine sensations of discomfort. The pain is real, it’s just not caused by injury.

Simply put: most phantom taper pains are your body recovering and your brain catastrophizing. Neither requires intervention.

The Mood Crash Is Neurochemical

If you’ve been snapping at people around you, struggling to sleep, or feeling strangely flat and unmotivated, that’s not weakness. That’s chemistry.

Research published in Psychoneuroendocrinology [6] found that the mood-elevating, anxiety-reducing effects of running are driven primarily by endocannabinoids, neurochemicals that cross the blood-brain barrier and promote feelings of calm and wellbeing. When you cut your mileage, you cut that daily neurochemical dose.

An article published in the AMAA Journal concluded that the reduced training involved in tapering prior to a race may actually worsen mood states [7],  a finding that should be validating for anyone currently questioning their emotional stability two weeks out.

A study published in Sports Psychology [8] found that endurance athletes experienced a 40% increase in anxiety levels when training volume was reduced by more than 30% during taper.

The good news is that knowing this helps. A study found that runners who were educated about expected taper symptoms experienced 34% less anxiety during the reduction phase.

You’re reading this. That’s already working in your favor.

Normal Symptoms vs. Red Flags

Here’s a practical guide to what warrants a deep breath versus what warrants a call to your doctor.

Completely Normal During Taper

Wandering aches that shift location day to day and aren’t consistently reproducible.

Heavy, dense legs that feel sluggish on easy runs.

Mild fatigue, low energy, or a general sense of being “off.”

A mild sore throat, runny nose, or general malaise as the immune system reboots.

Irritability, mood swings, and an irrational urge to do more training.

Difficulty sleeping despite physical fatigue.

Obsessing over weather forecasts, gear, and race-day logistics.

Worth Taking Seriously

Sharp, localized pain that worsens with every run, especially if it’s consistent rather than wandering.

Pain that changes your gait or causes you to limp, even slightly.

Illness with symptoms below the neck: chest tightness, fever, significant body aches.

Any symptom that persists and actively worsens over three or more days.

The bottom line? If you’re not sure, get it checked. The peace of mind is worth it, and ruling out a real problem is never a waste of time this close to your race.

Managing Taper Anxiety: What Actually Works

Reframe What Rest Means

The most powerful mental shift you can make during taper is this: you are not doing less. You are doing something different.

Taper is a training stimulus in its own right,  one that your body specifically needs after months of progressive overload.

Instead of telling yourself “I’m losing fitness,” try: “I’m allowing my body to express the fitness I’ve already built.” It sounds simple, but the language you use internally genuinely shapes your physiological response to stress.

Use Visualization as a Structured Mental Workout

Research by Dr. Krista Munroe-Chandler [9] found that structured visualization during the taper period improved race performance by an average of 2.3% compared to controls.

Spend 10 to 15 minutes daily walking through specific race scenarios: hitting your target pace at mile 18, executing your fueling plan, pushing through a tough patch at mile 22.

This gives your brain a productive outlet for all that nervous energy,  and it actually works.

Review Your Training Log

Open your Strava, your training spreadsheet, your running journal,  whatever you use.

Look at what you’ve done. The long runs. The early mornings. The sessions you showed up for when you didn’t want to.

Taper anxiety often masquerades as a confidence problem. Your training log is objective evidence that the confidence is warranted.

Protect Your Immune System

Now is not the time to get sick.

Prioritize sleep above everything,  aim for eight or more hours, since human growth hormone (which drives muscle repair and recovery) is primarily released during deep sleep.

Avoid crowded, high-risk illness environments as much as possible in race week. Eat nutrient-dense food, stay well hydrated, and begin gradually increasing carbohydrate intake in the final three days before race day to support glycogen supercompensation.

What to Do With All That Extra Time

The absence of two-hour long runs suddenly opens up a lot of hours in your week. Here’s how to fill them without sabotaging your taper.

Plan race-day logistics in exhaustive detail: transport, gear, nutrition timing, pacing strategy, warm-up routine. The mental clarity this creates is its own form of race preparation.

Read a running book or revisit a race that inspired you to sign up in the first place. Staying connected to your “why” is powerful in the final stretch.

Spend quality time with the people who’ve accommodated your training for the past five months. They deserve it,  and reconnecting is good for your mental state.

Keep moving, but keep it light: gentle yoga, easy walking, and short maintenance runs are all fine. Just avoid any new activity that carries injury risk.

And avoid spending too much time on your feet at the race expo. It’s tempting, but you’ve earned the right to be a little boring this week.

Trust the Process You’ve Already Built

Taper madness is nearly universal among marathon runners. The anxiety, the phantom pains, the sudden conviction that everything is falling apart, these aren’t signs you’re doing something wrong.

They’re signs you trained hard enough to feel the contrast.

The research on tapering is unambiguous: runners who execute a proper taper run faster. Your glycogen stores are filling. Your muscles are repairing. Your neuromuscular system is sharpening. Your body is getting ready to do something remarkable.

The fitness is already there. The taper isn’t the question mark, it’s the answer.

Now trust it.

 

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References

McCormick, A., Meijen, C., & Marcora, S. (2015). Psychological determinants of whole-body endurance performance. Sports Medicine, 45(7), 997–1015.

Ivy, J. L., et al. (2016). Postexercise muscle glycogen resynthesis in humans. Journal of Applied Physiology. https://journals.physiology.org/doi/full/10.1152/japplphysiol.00860.2016

Mujika, I., et al. (2023). Effects of tapering on performance in endurance athletes: A systematic review and meta-analysis. PMC / NCBI. https://pmc.ncbi.nlm.nih.gov/articles/PMC10171681/

Smyth, B., & Lawlor, A. (2021). Longer disciplined tapers improve marathon performance for recreational runners. Frontiers in Sports and Active Living, 3, 735220.

Nieman, D. C. (2000). Exercise effects on systemic immunity. Immunology and Cell Biology, 78(5), 496–501.

Siebers, M., Biedermann, S. V., & Fuss, J. (2021). Exercise-induced euphoria and anxiolysis do not depend on endogenous opioids in humans. Psychoneuroendocrinology, 126, 105169.

Raglin, J. S. (2008). Taper and anxiety in marathon runners. AMAA Journal.

Raglin, J. S., & Wilson, M. (2008). State anxiety following 20-week athletic season. British Journal of Sports Medicine, 42(1), 13–17.

Munroe-Chandler, K., Hall, C., & Weinberg, R. (2004). A qualitative analysis of the types of goals athletes set in training and competition. Journal of Sport Behavior, 27(1), 58–74.

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